Running with gitlab-runner 14.8.1 (6a42249e)  on remeis-runner Wa55HBqs section_start:1666692787:prepare_executor Preparing the "ssh" executor Using SSH executor... section_end:1666692788:prepare_executor section_start:1666692788:prepare_script Preparing environment Running on serpens via serpens... section_end:1666692788:prepare_script section_start:1666692788:get_sources Getting source from Git repository Fetching changes... Reinitialized existing Git repository in /scratch1/gitlab-runner/builds/Wa55HBqs/0/gitlab/remeis/isisscripts/.git/ Checking out 2a57e690 as refs/merge-requests/190/head... Removing doc/src/ Removing share/isisscripts.md Removing share/isisscripts.sl Removing share/isisscripts.txt Removing share/isisscripts.txt.md Skipping Git submodules setup section_end:1666692788:get_sources section_start:1666692788:download_artifacts Downloading artifacts Downloading artifacts for build (12999)... Runtime platform  arch=amd64 os=linux pid=1751624 revision=6a42249e version=14.8.1 Downloading artifacts from coordinator... ok  id=12999 responseStatus=200 OK token=xLoeyWWS section_end:1666692788:download_artifacts section_start:1666692788:step_script Executing "step_script" stage of the job script $ source /software/profile.in $ module load heasoft $ module load jed $ module load isis $ TARGET=/software/Science/isisscripts $ make test test/fft_has_not_been_redefined_differently.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat test/require_isisscripts_does_not_produce_any_error.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat test/require_isisscripts_load_with_different_available_modules.sl Testing different Module combinations ... Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 xspec % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat fitswcs fork gcontour gsl gslinterp pcre pgplot png rand select socket stats vector wcsfuns xfig ... done! test/require_isisscripts_loads_without_additional_modules.sl test/test_CCF_1d.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat test/test_dms2deg.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat test/test_documentation.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat ISISSCRIPTS defines Global functions: 195, 115 undocumented Local functions: 1109, 260 undocumented =============== Undocumented Globals =============== HeTriplet abkn_plaw adbkn_plaw add_cursor_line add_line aplaw apply_i2x_grp apply_x2i_grp aqpo asinwave asqrwave azfc bkn_plaw calc_eqw calc_flux cash chain_confidence chain_hist chain_hist2d chain_plot chain_set_params conf_map conf_map_fail_hook corback corfile data_flux dbkn_plaw delete_line dummy emcee eqw fcorback fcorback_fit fcorfile fcorfile_fit find_line four_chip fstat_dat fstat_data fstat_gehr fstat_mod fstat_norm gauss_2d get_xyfit_fun haPSFcos i2x_grp init_line isis_fit_improved_hook line_model_prefix list_all load_radio log_grid_hook marq mgauss minim minus minus_defaults minus_fit model_flux mpi_emcee mpi_new_best_fit_hook mpi_read_chain mrg_grid msg old_read_chain old_to_new_chain opdc pbd pbi pha2_bkg plaw plot_covar qpo read_chain read_optical read_radio rms_gauss rolling_fit save_line_models sep_grid simple_gpile simple_gpile2 simple_gpile3 sinwave sitar_epfold_rate tbnew tbnew_default tbnew_feo tbnew_feo_default tbnew_feo_fit tbnew_fit tbnew_gas tbnew_gas_default tbnew_gas_fit tbnew_metal tbnew_pcf tbnew_pcf_default tbnew_pcf_fit tbnew_rel tbnew_rel_default tbnew_rel_fit tbnew_simple tbnew_simple_z three_chip tilt tilt_fit usr_grid vec_hist vec_hist2d write_chain write_x_grp writeplot x2i_grp xfig_chain_plot zfc =============== Undocumented Locals =============== F_fit HeTriplet_defaults HeTriplet_fit ImageMagick_text Lambert_Equal_Area_projection PG_report UNIXtime2MJD Voigt_fit Weibull_default Weibull_fit XTEtoRealtime __xy _fsf_add_string _sso_client _sso_server _sso_split_input abkn_plaw_defaults abkn_plaw_fit ad_colormap_gauss ad_colormap_norm_col adbkn_plaw_defaults adbkn_plaw_fit aglc_filter aglc_jd_to_phase aglc_reset_regs aglc_tobs_to_phase aglc_truncate_events aglc_truncate_wave aplaw_defaults aplaw_fit aqpo_defaults aqpo_fit areascale_post_model_hook arrtimes_default_hook arrtimes_fit asinwave_defaults asinwave_fit asqrwave_defaults asqrwave_fit azfc_defaults azfc_fit bayes_nconf bayes_sconf bkn_plaw_defaults bkn_plaw_fit bknpowerlaw_xyfit_default brew ceil2 check_parameter_hit chip close_aa1col_xlabel close_aa2col_xlabel close_match compare_pars compressedArrayStr cutoffpl2_defaults cutoffpl2_fit dbkn_plaw_defaults dbkn_plaw_fit diskline2_fit distribution_matrix dummy_default dummy_fit ellipse_xy_xyfit ellipse_xy_xyfit_default empiric_cdf_inverse energy_resolution eqwFit_fit escapeStr escapedParameterName exponential_xyfit_default ext_line_type factorset fcorback_default fcorfile_default find_directories find_files floor2 flux_err four_chip_defaults four_chip_fit galaxy_elliptical_fit gapsync gapsync2 garf_gaps gauss_2d_defaults gauss_2d_fit gauss_2d_integrated_defaults gauss_2d_integrated_fit gauss_xyfit gauss_xyfit_default get2matches get_2d_data_grid get_2d_model get_diverging get_line_ids get_line_lambdas get_line_transition get_unpiled_data_flux group_data_keV haPSFcos_fit hquantile indices_of_2Darray init_Apec integrate2d_test interpol_params ionabs_default ionabs_fit lcseg linear_xyfit_default lines_defaults lines_fit list_all_lines log_par_defaults log_par_en_defaults log_par_en_fit log_par_fit lorentzmb_default lorentzmb_fit lorentzmb_old_default lorentzmb_old_fit make_conlines matrix33_adjoint matrix33_cofactors matrix33_get_diag matrix33_get_trace matrix33_inverse max_struct_field mgauss_defaults mgauss_fit minus_defaults modelComponents multibknpower_fit multiple_string multiplot_data_m_lam_counts narrowline_default narrowline_fit obfuscate_string opdf open_plot_aa1col open_plot_aa2col opmc opmf par2tex par_names_to_tex pdc pdf plaw_defaults plaw_fit plt_garf_gaps pmc pmf powerlaw_xyfit_default pr_garf_gaps pulsarorbit_fit_constraint pushKommaString pushString qpo_defaults qpo_fit quadratic_xyfit quadratic_xyfit_default quasar_accr_fit query_user rate2mdot rcl_init_mpi_request rcl_mpi_barrier rcl_mpi_bcast_double rcl_mpi_bcast_int rcl_mpi_bcast_param rcl_mpi_client rcl_mpi_dist_param rcl_mpi_dist_state rcl_mpi_finalize rcl_mpi_gather_conf rcl_mpi_gather_double rcl_mpi_gather_int rcl_mpi_ibcast_double rcl_mpi_init rcl_mpi_iprobe rcl_mpi_iprobe_tag rcl_mpi_irecv_double rcl_mpi_isend_double rcl_mpi_master rcl_mpi_msg_add rcl_mpi_msg_cp rcl_mpi_msg_del rcl_mpi_msg_free rcl_mpi_msg_recv_double rcl_mpi_msg_update rcl_mpi_numtasks rcl_mpi_org_irecv_double rcl_mpi_org_irecv_int rcl_mpi_org_isend_double rcl_mpi_org_isend_int rcl_mpi_org_recv_double rcl_mpi_org_recv_int rcl_mpi_org_send_double rcl_mpi_org_send_int rcl_mpi_org_wait rcl_mpi_org_waitany rcl_mpi_org_waitsome rcl_mpi_printerror rcl_mpi_probe rcl_mpi_rank rcl_mpi_rank_master rcl_mpi_recv_double rcl_mpi_recv_int rcl_mpi_recv_param rcl_mpi_recv_state rcl_mpi_return_param rcl_mpi_return_state rcl_mpi_scatter_double rcl_mpi_scatter_int rcl_mpi_send_double rcl_mpi_send_int rcl_mpi_status_src rcl_mpi_status_tag rcl_mpi_update rebinDensity rebin_error_hook reduce_image_resolution removeLeadingZeros renormalizeTo rms_gauss_defaults rms_gauss_fit set_local_paths shift_2d shift_2d_old simple_gpile2_defaults simple_gpile2_fit simple_gpile3_defaults simple_gpile3_fit simple_gpile_defaults simple_gpile_fit sinwave2_default sinwave2_fit sinwave_defaults sinwave_fit sixte_psfgen sqrsinc_xyfit step1_fit step2_fit tbnew_metal_fit tbnew_simple_fit tbnew_simple_z_fit three_chip_defaults three_chip_fit tilt_defaults timegap timeseg timesync use_HeTriplet use_localmodel use_simple_gpile vradbinary_default vradbinary_fit xfig_get_normalized_position zfc_defaults zfc_fit zpc_tbnew_simple_fit test/test_easter.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat test/test_jd.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat test/test_position_angle.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat test/test_reflection_fraction_relxill.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat test/test_save_slang_variable.sl Solar Abundance Vector set to angr: Anders E. & Grevesse N. Geochimica et Cosmochimica Acta 53, 197 (1989) Cross Section Table set to vern: Verner, Ferland, Korista, and Yakovlev 1996 % loading xspec model from '/software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30' Loading /software/Ubuntu-20.04/Science/Localmodels/tbnew/2.3.2+heasoft-6.30/libabsmodel.so with parameter file lmodel.dat section_end:1666692804:step_script Job succeeded